Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944011.1_cds_XP_016486963.1_77752
CDS Infomation

[gene=LOC107807152] [db_xref=GeneID:107807152] [protein=methionine--tRNA ligase, cytoplasmic-like] [partial=3'] [protein_id=XP_016486963.1] [location=complement(join(<9..100,783..901,1599..1713,1813..1919,2063..2153,2908..3051,3234..3464,3788..3943,4113..4266,7804..7948,8049..8193))] [gbkey=CDS]
Sequence

ATGGGCGATTCTTCCACCGCCGGCAACGGCGACTATCTGCCGCCGACAACTCCCAAACTT
CCGATACCGGGAAAACGGAACATCCTCATCACAAGCGCTTTGCCATACGTCAACAACGTT
CCTCACCTCGGAAACATCATCGGAAGTGTGTTGAGTGCGGACGTGTTCGCGAGATACTGT
AGGCTTCGGGATTACAATGCAGTATACATGTGTGGTACTGATGAATATGGCACGGCTACT
GAGACTAAAGCTTTGGAAGAAAATTCTACTCCCAAGCAAATTTGTGACAAATACCATGCA
ATTCATAGAGAAGTTTATAAATGGTTTGATATAAGCTTCGATCAATTTGGACGCACGTCT
ACTCCACAACAGACGGAAGTTTGTCAGGCGATCTTTAACAAGCTTTGGGAGAATAATTGG
CTCTCTGAGAACACTATGCAGCAGCCGTACTGTGACACATGCAAAAAGTTTTTGGCGGAC
CGGCTTGTAGAGGGTAACTGCCCAACACCAGGTTGCAACTATGATTCTGCACGTGGAGAT
CAATGTGAGAAGTGTGGGAAACTCTTAAATCCCACTGAACTGAAGGATCCAAGATGCAAG
GTCTGTCGTAACACCCCTTGCATCCGAGATACAGACCATTTGTTCCTTGAGCTCCCTTTG
CTAAAGGATAAATTAGAAACTTACGTCAACAACATGTCAGTGGCTGGAGGATGGAGTCAG
AATGCTGTCCACACAACAAATGCCTGGCTTAGAGAAGGACTAAAGCAAAGGTGTATAACT
AGAGATTTGAAATGGGGGGTTCCAGTTCCACATGAAAAATACAAGGAGAAGGTTTTCTAC
GTGTGGTTCGACGCTCCTATTGGATATGTATCAATAACATCATGCTATACAACAGAGTGG
GAGAAGTGGTGGAAGAATCCAGAGAATGTGGAGCTCTATCAGTTTATGGGCAAAGATAAT
GTGCCTTTTCACACTGTGATTTTCCCATCTACGCTACTTGGAACTGGTGAAAACTGGACT
CTTATGAAGACTATCAGTGTAACAGAATACTTGAACTATGAAGCAGGCAAGTTCTCGAAG
AGTAAGGGCATAGGAGTATTCGGTAATGATGCAAAAGATACAAACATTCCTGTAGAAGTA
TGGAGATATTACTTGCTGACAAACAGGCCAGAGGTGTCGGACACTTTGTTTAGCTGGGCA
GATTTACAAGCAAAGTTAAACAGCGAGTTGCTAAGCAACTTAGGCAATTTCGTCAATAGA
GTCCTAAGTTTCATTGCAAAAGATCTGGTTTCAGGTTATGGTTCCATAATTCCCAATCCT
GAAGGAGCTGAATCACACCCTTTAACTAAGGCCTTGGGTGAAAAAGTTGGAAATTATGTG
GAGCAATATATAGAAGCTATGGAGAAGGTTAAATTGAAGCAAGGCTTGAAGATTGCTATG
TCTATTTCTGGAGAAGGAAACGGTTATTTGCAAGTAAGCCTGTCAAATACTTCCCAACT

Peptide Sequence

PEP ID

XP_016486963.1
PEP Infomation

PREDICTED: methionine--tRNA ligase, cytoplasmic-like, partial [Nicotiana tabacum]
Sequence

MGDSSTAGNGDYLPPTTPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARYC
RLRDYNAVYMCGTDEYGTATETKALEENSTPKQICDKYHAIHREVYKWFDISFDQFGRTS
TPQQTEVCQAIFNKLWENNWLSENTMQQPYCDTCKKFLADRLVEGNCPTPGCNYDSARGD
QCEKCGKLLNPTELKDPRCKVCRNTPCIRDTDHLFLELPLLKDKLETYVNNMSVAGGWSQ
NAVHTTNAWLREGLKQRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTTEW
EKWWKNPENVELYQFMGKDNVPFHTVIFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSK
SKGIGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFSWADLQAKLNSELLSNLGNFVNR
VLSFIAKDLVSGYGSIIPNPEGAESHPLTKALGEKVGNYVEQYIEAMEKVKLKQGLKIAM
SISGEGNGYLQVSLSNTSQL

Transcript Sequence

Gene sequence data has not been registered.